BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028F12SP1|AL428949
(845 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1635 0.0
>3x_Contig1800
Length = 38778
Score = 1635 bits (823), Expect = 0.0
Identities = 831/835 (99%)
Strand = Plus / Plus
Query: 11 ttttgtggggggtggaaaagtcgattaggatcttgcagcacagaaacttcgcaggggttt 70
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 9790 ttttgtggggggtggaaaagtcgattaggatcttgcagcacagaaactgcgcaggggttt 9849
Query: 71 ttttcatcttggagaagcaactktctaaattcgacacaaacaaaaactgaaaaatggaaa 130
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 9850 ttttcatcttggagaagcaactggctaaattcgacacaaacaaaaactgaaaaatggaaa 9909
Query: 131 ataaaaaatgaaaaagcaagctgaattcgaagaagggagaattccgccttctgcaaccac 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9910 ataaaaaatgaaaaagcaagctgaattcgaagaagggagaattccgccttctgcaaccac 9969
Query: 191 actaatggttggtagtcaatagatacgcattagaaggttactattttatgagtcgatccc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9970 actaatggttggtagtcaatagatacgcattagaaggttactattttatgagtcgatccc 10029
Query: 251 cgcggaaatttaggaattttaaacttgggcttgatatacgtcggtatagtgtatctggta 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10030 cgcggaaatttaggaattttaaacttgggcttgatatacgtcggtatagtgtatctggta 10089
Query: 311 tttttgccaatggttcctgtgcccgtgcccgtgcccgtgtgctcatgcgatgcattgtga 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10090 tttttgccaatggttcctgtgcccgtgcccgtgcccgtgtgctcatgcgatgcattgtga 10149
Query: 371 ctactgcttggcaaggcaaatcagcggtctgcggccgtactctaaagccggacagacatg 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10150 ctactgcttggcaaggcaaatcagcggtctgcggccgtactctaaagccggacagacatg 10209
Query: 431 gtggggtgycttttcggtccataagtgtaactagctagctacaagtatgttctgtgcaaa 490
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10210 gtggggtgccttttcggtccataagtgtaactagctagctacaagtatgttctgtgcaaa 10269
Query: 491 gatggtaaaggttgcatacagtcaagttgctgtccttggacctggtctgacctgacctag 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10270 gatggtaaaggttgcatacagtcaagttgctgtccttggacctggtctgacctgacctag 10329
Query: 551 cttaacattgcatagcgcatacccacttggatggatgcaggagtgttacaaatcggcgaa 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10330 cttaacattgcatagcgcatacccacttggatggatgcaggagtgttacaaatcggcgaa 10389
Query: 611 cagttctccttgtttgtttttggtcatagtcacgtccggctacacacaagatatggcaca 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10390 cagttctccttgtttgtttttggtcatagtcacgtccggctacacacaagatatggcaca 10449
Query: 671 gtatgtgtagatgcgagcgaagatacggctggaaaacaggtgggttttgaaggatagaca 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10450 gtatgtgtagatgcgagcgaagatacggctggaaaacaggtgggttttgaaggatagaca 10509
Query: 731 gaaggcaaaagggtgggcaaaaagtcgggcactcaggcaagtattggcatgatcaaacca 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10510 gaaggcaaaagggtgggcaaaaagtcgggcactcaggcaagtattggcatgatcaaacca 10569
Query: 791 gattaagttctaggccaagaacatatttcggcccactgactcccgccaaaaaaaa 845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10570 gattaagttctaggccaagaacatatttcggcccactgactcccgccaaaaaaaa 10624
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5150
Number of Sequences: 1807
Number of extensions: 5150
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 845
length of database: 10,358,551
effective HSP length: 16
effective length of query: 829
effective length of database: 10,329,639
effective search space: 8563270731
effective search space used: 8563270731
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)